SidaGhanaV1, Main, Exploration, bibRecord, 001130

Genetic analysis of HIV type 2 from Ghana and Guinea-Bissau, West Africa

Identifieur interne : 001130 ( Main/Exploration ); précédent : 001129; suivant : 001131

Genetic analysis of HIV type 2 from Ghana and Guinea-Bissau, West Africa

Auteurs : Koichi Ishikawa [Japon, Ghana] ; Wouter Janssens [Belgique] ; Jacob S. Banor [Ghana] ; Teiichiro Shinno [Japon] ; Joao Piedade [Portugal] ; Tetsutaro Sata [Japon] ; William K. Ampofo [Ghana] ; James A. M. Brandful [Ghana] ; Yoshio Koyanagi [Japon] ; Naoki Yamamoto [Japon] ; Wanda F. Canas-Ferreira [Portugal] ; Yaw Adu-Sarkodie [Ghana] ; Takeshi Kurata [Japon]

Source :

AIDS research and human retroviruses [ 0889-2229 ] ; 2001.

RBID : Pascal:02-0330300

Descripteurs français

KwdFr :
- ADN viral (analyse), Analyse de séquence d'ADN, Données de séquences moléculaires, Ghana (épidémiologie), Guinée-Bissau (épidémiologie), Humains, Infections à VIH (virologie), Infections à VIH (épidémiologie), Phylogénie, Répétition terminale longue du VIH (génétique), VIH-2 (Virus de l'Immunodéficience Humaine de type 2) (), VIH-2 (Virus de l'Immunodéficience Humaine de type 2) (génétique).
MESH :
- analyse : ADN viral.
- génétique : Répétition terminale longue du VIH, VIH-2 (Virus de l'Immunodéficience Humaine de type 2).
- virologie : Infections à VIH.
- épidémiologie : Ghana, Guinée-Bissau, Infections à VIH.
Pascal (Inist)
- Analyse de séquence d'ADN, Données de séquences moléculaires, Humains, Phylogénie, VIH-2 (Virus de l'Immunodéficience Humaine de type 2), Virus HIV2, Homme, Ghana, Guinée Bissau, Afrique Ouest, Phylogenèse, Séquence LTR, Isolat, Prévalence, Côte d'Ivoire.
Wicri :
- geographic : Ghana, Côte d'Ivoire, Guinée-Bissau.
- topic : Homme.

English descriptors

KwdEn :
- DNA, Viral (analysis), Ghana, Ghana (epidemiology), Guinea-Bissau, Guinea-Bissau (epidemiology), HIV Infections (epidemiology), HIV Infections (virology), HIV Long Terminal Repeat (genetics), HIV-2 (classification), HIV-2 (genetics), HIV-2 virus, Human, Humans, Isolate, Ivory Coast, LTR sequence, Molecular Sequence Data, Phylogeny, Prevalence, Sequence Analysis, DNA, West Africa.
MESH :
- chemical , analysis : DNA, Viral.
- geographic , epidemiology : Ghana, Guinea-Bissau.
- classification : HIV-2.
- epidemiology : HIV Infections.
- genetics : HIV Long Terminal Repeat, HIV-2.
- virology : HIV Infections.
- Humans, Molecular Sequence Data, Phylogeny, Sequence Analysis, DNA.

Abstract

The phylogenetic variability of part of the long terminal repeat (LTR) region of HIV-2 strains isolated in 1995 from five individuals residing in Bissau, the capital city of Guinea-Bissau, and collected from seven persons from Kumasi, Ghana in 1996-1997, was analyzed. All Guinean samples and all but one Ghanaian sample clustered with HIV-2 subtype A. One Ghanaian sample (14%) was classified as HIV-2 subtype B. This study adds to previous reports on HIV-2 subtype distribution in West Africa indicating local prevalence of HIV-2 subtype B in Ivory Coast and neighboring Ghana.

Affiliations:

Belgique, Ghana, Japon, Portugal
Province d'Anvers, Région de Kantō, Région du Grand Accra
Accra, Anvers, Tokyo

Le document en format XML

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<author><name sortKey="Adu Sarkodie, Yaw" sort="Adu Sarkodie, Yaw" uniqKey="Adu Sarkodie Y" first="Yaw" last="Adu-Sarkodie">Yaw Adu-Sarkodie</name>
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<author><name sortKey="Kurata, Takeshi" sort="Kurata, Takeshi" uniqKey="Kurata T" first="Takeshi" last="Kurata">Takeshi Kurata</name>
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</inist:fA14>
<country>Japon</country>
<placeName><settlement type="city">Tokyo</settlement>
<region type="région">Région de Kantō</region>
</placeName>
</affiliation>
</author>
</analytic>
<series><title level="j" type="main">AIDS research and human retroviruses</title>
<title level="j" type="abbreviated">AIDS res. hum. retroviruses</title>
<idno type="ISSN">0889-2229</idno>
<imprint><date when="2001">2001</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt><title level="j" type="main">AIDS research and human retroviruses</title>
<title level="j" type="abbreviated">AIDS res. hum. retroviruses</title>
<idno type="ISSN">0889-2229</idno>
</seriesStmt>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>DNA, Viral (analysis)</term>
<term>Ghana</term>
<term>Ghana (epidemiology)</term>
<term>Guinea-Bissau</term>
<term>Guinea-Bissau (epidemiology)</term>
<term>HIV Infections (epidemiology)</term>
<term>HIV Infections (virology)</term>
<term>HIV Long Terminal Repeat (genetics)</term>
<term>HIV-2 (classification)</term>
<term>HIV-2 (genetics)</term>
<term>HIV-2 virus</term>
<term>Human</term>
<term>Humans</term>
<term>Isolate</term>
<term>Ivory Coast</term>
<term>LTR sequence</term>
<term>Molecular Sequence Data</term>
<term>Phylogeny</term>
<term>Prevalence</term>
<term>Sequence Analysis, DNA</term>
<term>West Africa</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>ADN viral (analyse)</term>
<term>Analyse de séquence d'ADN</term>
<term>Données de séquences moléculaires</term>
<term>Ghana (épidémiologie)</term>
<term>Guinée-Bissau (épidémiologie)</term>
<term>Humains</term>
<term>Infections à VIH (virologie)</term>
<term>Infections à VIH (épidémiologie)</term>
<term>Phylogénie</term>
<term>Répétition terminale longue du VIH (génétique)</term>
<term>VIH-2 (Virus de l'Immunodéficience Humaine de type 2) ()</term>
<term>VIH-2 (Virus de l'Immunodéficience Humaine de type 2) (génétique)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>DNA, Viral</term>
</keywords>
<keywords scheme="MESH" type="geographic" qualifier="epidemiology" xml:lang="en"><term>Ghana</term>
<term>Guinea-Bissau</term>
</keywords>
<keywords scheme="MESH" qualifier="analyse" xml:lang="fr"><term>ADN viral</term>
</keywords>
<keywords scheme="MESH" qualifier="classification" xml:lang="en"><term>HIV-2</term>
</keywords>
<keywords scheme="MESH" qualifier="epidemiology" xml:lang="en"><term>HIV Infections</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>HIV Long Terminal Repeat</term>
<term>HIV-2</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Répétition terminale longue du VIH</term>
<term>VIH-2 (Virus de l'Immunodéficience Humaine de type 2)</term>
</keywords>
<keywords scheme="MESH" qualifier="virologie" xml:lang="fr"><term>Infections à VIH</term>
</keywords>
<keywords scheme="MESH" qualifier="virology" xml:lang="en"><term>HIV Infections</term>
</keywords>
<keywords scheme="MESH" qualifier="épidémiologie" xml:lang="fr"><term>Ghana</term>
<term>Guinée-Bissau</term>
<term>Infections à VIH</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Humans</term>
<term>Molecular Sequence Data</term>
<term>Phylogeny</term>
<term>Sequence Analysis, DNA</term>
</keywords>
<keywords scheme="Pascal" xml:lang="fr"><term>Analyse de séquence d'ADN</term>
<term>Données de séquences moléculaires</term>
<term>Humains</term>
<term>Phylogénie</term>
<term>VIH-2 (Virus de l'Immunodéficience Humaine de type 2)</term>
<term>Virus HIV2</term>
<term>Homme</term>
<term>Ghana</term>
<term>Guinée Bissau</term>
<term>Afrique Ouest</term>
<term>Phylogenèse</term>
<term>Séquence LTR</term>
<term>Isolat</term>
<term>Prévalence</term>
<term>Côte d'Ivoire</term>
</keywords>
<keywords scheme="Wicri" type="geographic" xml:lang="fr"><term>Ghana</term>
<term>Côte d'Ivoire</term>
<term>Guinée-Bissau</term>
</keywords>
<keywords scheme="Wicri" type="topic" xml:lang="fr"><term>Homme</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">The phylogenetic variability of part of the long terminal repeat (LTR) region of HIV-2 strains isolated in 1995 from five individuals residing in Bissau, the capital city of Guinea-Bissau, and collected from seven persons from Kumasi, Ghana in 1996-1997, was analyzed. All Guinean samples and all but one Ghanaian sample clustered with HIV-2 subtype A. One Ghanaian sample (14%) was classified as HIV-2 subtype B. This study adds to previous reports on HIV-2 subtype distribution in West Africa indicating local prevalence of HIV-2 subtype B in Ivory Coast and neighboring Ghana.</div>
</front>
</TEI>
<affiliations><list><country><li>Belgique</li>
<li>Ghana</li>
<li>Japon</li>
<li>Portugal</li>
</country>
<region><li>Province d'Anvers</li>
<li>Région de Kantō</li>
<li>Région du Grand Accra</li>
</region>
<settlement><li>Accra</li>
<li>Anvers</li>
<li>Tokyo</li>
</settlement>
</list>
<tree><country name="Japon"><region name="Région de Kantō"><name sortKey="Ishikawa, Koichi" sort="Ishikawa, Koichi" uniqKey="Ishikawa K" first="Koichi" last="Ishikawa">Koichi Ishikawa</name>
</region>
<name sortKey="Koyanagi, Yoshio" sort="Koyanagi, Yoshio" uniqKey="Koyanagi Y" first="Yoshio" last="Koyanagi">Yoshio Koyanagi</name>
<name sortKey="Kurata, Takeshi" sort="Kurata, Takeshi" uniqKey="Kurata T" first="Takeshi" last="Kurata">Takeshi Kurata</name>
<name sortKey="Sata, Tetsutaro" sort="Sata, Tetsutaro" uniqKey="Sata T" first="Tetsutaro" last="Sata">Tetsutaro Sata</name>
<name sortKey="Shinno, Teiichiro" sort="Shinno, Teiichiro" uniqKey="Shinno T" first="Teiichiro" last="Shinno">Teiichiro Shinno</name>
<name sortKey="Yamamoto, Naoki" sort="Yamamoto, Naoki" uniqKey="Yamamoto N" first="Naoki" last="Yamamoto">Naoki Yamamoto</name>
</country>
<country name="Ghana"><region name="Région du Grand Accra"><name sortKey="Ishikawa, Koichi" sort="Ishikawa, Koichi" uniqKey="Ishikawa K" first="Koichi" last="Ishikawa">Koichi Ishikawa</name>
</region>
<name sortKey="Adu Sarkodie, Yaw" sort="Adu Sarkodie, Yaw" uniqKey="Adu Sarkodie Y" first="Yaw" last="Adu-Sarkodie">Yaw Adu-Sarkodie</name>
<name sortKey="Ampofo, William K" sort="Ampofo, William K" uniqKey="Ampofo W" first="William K." last="Ampofo">William K. Ampofo</name>
<name sortKey="Banor, Jacob S" sort="Banor, Jacob S" uniqKey="Banor J" first="Jacob S." last="Banor">Jacob S. Banor</name>
<name sortKey="Brandful, James A M" sort="Brandful, James A M" uniqKey="Brandful J" first="James A. M." last="Brandful">James A. M. Brandful</name>
</country>
<country name="Belgique"><region name="Province d'Anvers"><name sortKey="Janssens, Wouter" sort="Janssens, Wouter" uniqKey="Janssens W" first="Wouter" last="Janssens">Wouter Janssens</name>
</region>
</country>
<country name="Portugal"><noRegion><name sortKey="Piedade, Joao" sort="Piedade, Joao" uniqKey="Piedade J" first="Joao" last="Piedade">Joao Piedade</name>
</noRegion>
<name sortKey="Canas Ferreira, Wanda F" sort="Canas Ferreira, Wanda F" uniqKey="Canas Ferreira W" first="Wanda F." last="Canas-Ferreira">Wanda F. Canas-Ferreira</name>
</country>
</tree>
</affiliations>
</record>

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Le SIDA au Ghana (serveur d'exploration)

Genetic analysis of HIV type 2 from Ghana and Guinea-Bissau, West Africa

Genetic analysis of HIV type 2 from Ghana and Guinea-Bissau, West Africa

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	Le SIDA au Ghana (serveur d'exploration)
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